Index

_

_str() (flika.roi.ROI_Base method)

A

Adaptive_threshold (class in flika.process.binary)

alert() (in module flika.global_vars)

B

Bilateral_filter (class in flika.process.filters) Binary_Dilation (class in flika.process.binary)

BlocksizeSlider (class in flika.process.binary) Boxcar_differential_filter (class in flika.process.filters) Butterworth_filter (class in flika.process.filters)

C

Canny_edge_detector (class in flika.process.binary) Change_datatype (class in flika.process.stacks) clear() (flika.app.application.FlikaApplication method) ClickableLabel (class in flika.app.application) close() (flika.app.plugin_manager.PluginManager static method) (flika.app.script_editor.ScriptEditor static method) (in module flika.process.file_) closed (flika.window.Window attribute) closeEvent() (flika.app.application.FlikaApplication method) (flika.app.plugin_manager.PluginManager method) (flika.app.script_editor.ScriptEditor method) (flika.window.Window method)

colorDialog (flika.roi.ROI_Base attribute) colorSelected() (flika.roi.ROI_Base method) commands (flika.window.Window attribute) Concatenate_stacks (class in flika.process.stacks) connected_console() (in module flika.app.terminal) crop() (flika.roi.ROI_rectangle method) currentROI (flika.window.Window attribute) currentTrace (in module flika.global_vars) currentWindow (in module flika.global_vars)

D

default_kernel_app() (in module flika.app.terminal) default_manager() (in module flika.app.terminal) Deinterleave (class in flika.process.stacks) delete() (flika.roi.ROI_Base method) Difference_filter (class in flika.process.filters) Difference_of_Gaussians (class in flika.process.filters) Divide (class in flika.process.math_)

Divide_trace (class in flika.process.math_) do_one_iteration() (flika.app.terminal.EmbeddedQtKernel method) dragEnterEvent() (flika.app.application.FlikaApplication method) (flika.app.script_editor.ScriptEditor method) dropEvent() (flika.app.application.FlikaApplication method) (flika.app.script_editor.ScriptEditor method) dtype (flika.window.Window attribute)

E

Editor (class in flika.app.script_editor) EmbeddedIPythonWidget (class in flika.app.terminal) EmbeddedQtKernel (class in flika.app.terminal)

EmbeddedQtKernelApp (class in flika.app.terminal) execute_request() (flika.app.terminal.EmbeddedQtKernel method) export() (flika.process.measure.Measure method)

F

filename (flika.window.Window attribute) flika (module) flika.app.application (module) flika.app.plugin_manager (module) flika.app.script_editor (module) flika.app.script_namespace (module) flika.app.settings_editor (module) flika.app.syntax (module) flika.app.terminal (module) flika.flika (module) flika.global_vars (module) flika.process.binary (module) flika.process.color (module) flika.process.file_ (module) flika.process.filters (module)

flika.process.math_ (module) flika.process.measure (module) flika.process.overlay (module) flika.process.progress_bar (module) flika.process.roi (module) flika.process.stacks (module) flika.roi (module) flika.tracefig (module) flika.utils (module) flika.window (module) FlikaApplication (class in flika.app.application) flush() (flika.app.application.Logger method) format() (in module flika.app.syntax) Fourier_filter (class in flika.process.filters) Frame_binning (class in flika.process.stacks) framerate (flika.window.Window attribute)

G

Gaussian_blur (class in flika.process.filters) get_permutation_tuple() (in module flika.process.file_) get_qapp() (in module flika.utils.app)

getnamespace() (in module flika.app.script_namespace) getScatterPts() (flika.window.Window method) getTrace() (flika.roi.ROI_Base method)

H

highlightBlock() (flika.app.syntax.PythonHighlighter method)

I

Image_calculator (class in flika.process.stacks) imageArray() (flika.window.Window method)

in_process_console() (in module flika.app.terminal) init_kernel() (flika.app.terminal.EmbeddedQtKernelApp method) ipython_terminal() (in module flika.app.terminal)

K

keyPressEvent() (flika.app.application.Logger method) (flika.app.script_editor.ScriptEditor method) (flika.window.Window method)

kymograph (flika.roi.ROI_line attribute) (flika.roi.ROI_rect_line attribute)

L

link() (flika.window.Window method) linkedROIs (flika.roi.ROI_Base attribute) load() (flika.global_vars.Settings method)

Load_Local_Plugins_Thread (class in flika.app.plugin_manager) load_ui() (in module flika.utils.misc) Logger (class in flika.app.application) Logically_combine (class in flika.process.binary)

M

m (in module flika.global_vars) makeROI() (in module flika.roi) match_multiline() (flika.app.syntax.PythonHighlighter method) Mean_filter (class in flika.process.filters) Measure (class in flika.process.measure) Median_filter (class in flika.process.filters) metadata (flika.window.Window attribute)

mouseClickEvent() (flika.window.Window method) mouseMoved() (flika.window.Window method) mousePressEvent() (flika.window.Window method) mt (flika.window.Window attribute) Multiply (class in flika.process.math_) mx (flika.window.Window attribute) my (flika.window.Window attribute)

N

name (flika.window.Window attribute)

nonpartial() (in module flika.utils.misc)

O

open_file() (in module flika.process.file_) open_file_gui() (in module flika.utils.misc)

open_image_sequence() (in module flika.process.file_) open_points() (in module flika.process.file_) open_rois() (in module flika.roi)

P

p1 (flika.tracefig.TraceFig attribute) p2 (flika.tracefig.TraceFig attribute) paste() (flika.window.Window method) pencilSettings() (in module flika.app.settings_editor) Pixel_binning (class in flika.process.stacks) plot() (flika.roi.ROI_Base method)

PluginManager (class in flika.app.plugin_manager) pointSettings() (in module flika.app.settings_editor) Power (class in flika.process.math_) ProcessLauncher (class in flika.process.progress_bar) ProgressBar (class in flika.process.progress_bar) pts (flika.roi.ROI_Base attribute) PythonHighlighter (class in flika.app.syntax)

R

random_color() (in module flika.utils.misc) Ratio (class in flika.process.math_) rectSettings() (in module flika.app.settings_editor) redirect_output() (in module flika.app.terminal) Remove_small_blobs (class in flika.process.binary) Resize (class in flika.process.stacks) resizeEvent() (flika.window.Window method)

ROI_Base (class in flika.roi) ROI_line (class in flika.roi) ROI_rect_line (class in flika.roi) ROI_rectangle (class in flika.roi) rois (flika.tracefig.TraceFig attribute) (flika.window.Window attribute) run() (flika.app.plugin_manager.Load_Local_Plugins_Thread method)

S

save() (flika.global_vars.Settings method) (flika.window.Window method) save_file() (in module flika.process.file_) save_file_gui() (in module flika.utils.misc) save_movie() (in module flika.process.file_) save_points() (in module flika.process.file_) save_rois() (flika.window.Window method) Scale_Bar (class in flika.process.overlay) ScriptEditor (class in flika.app.script_editor) Set_value (class in flika.process.roi) setAsCurrentWindow() (flika.window.Window method) setIndex() (flika.window.Window method) setName() (flika.window.Window method) Settings (class in flika.global_vars)

SettingsEditor (class in flika.app.settings_editor) setWidth() (flika.roi.ROI_rect_line method) show() (flika.app.plugin_manager.PluginManager static method) (flika.app.script_editor.ScriptEditor static method) (flika.app.settings_editor.SettingsEditor static method) ShowCheckbox (class in flika.process.overlay) sigPluginLoaded (flika.app.plugin_manager.PluginManager attribute) Split_channels (class in flika.process.color) start() (flika.app.terminal.EmbeddedQtKernelApp method) start_flika() (in module flika.flika) status_light (flika.app.application.Logger attribute) str2func() (in module flika.app.plugin_manager) Subtract (class in flika.process.math_) Subtract_trace (class in flika.process.math_)

T

Terminal (class in flika.app.terminal) Threshold (class in flika.process.binary) Time_Stamp (class in flika.process.overlay)

TraceFig (class in flika.tracefig) traceWindow (flika.roi.ROI_Base attribute) traceWindows (in module flika.global_vars) Trim (class in flika.process.stacks)

U

unlink() (flika.window.Window method)

unplot() (flika.roi.ROI_Base method)

V

Variance_filter (class in flika.process.filters)

W

Wavelet_filter (class in flika.process.filters) win (in module flika.global_vars)

Window (class in flika.window) windows (in module flika.global_vars) write() (flika.app.application.Logger method)

Z

ZProject (class in flika.process.stacks)